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Rstats | L. Collado-Torres Toggle navigation L. Collado-Torres Home Publications Talks Blog CV Students Teaching Contact Search Rstats R Gene Regulatory Interaction Formulator For Inquiring Networks This blog post was written by ME Martinez-Sanchez, S Muñoz, M Carrillo, E Azpeitia, D Rosenblueth and originally posted at the CDSB blog.1 In this blog post we will describe the package rGriffin (Martinez-Sanchez, Muñoz, Carrillo, Azpeitia, et al., 2018) that was one of the projects ripened during the TIB2018-BCDW. We hope to protract developing Griffin and rGriffin (Martinez-Sanchez, Muñoz, Carrillo, Azpeitia, et al., 2018). If you have ideas, suggestions or bugs, please contact us via rGriffin GitHub repo. Getting ready to shepherd rOpenSci unconf18 and probably working on tidyverse-like functions for the first time It’s Friday 7pm and it’s been a long week with ups and downs1. But I’m enthused as I write this blog post. In less than a month from now I’ll be peekaboo rOpenSci unconf18 and it’ll be my first time at this type of event. Yay! Building on my streak of good news, I'm delighted to have been selected to shepherd @rOpenSci #Unconf18 https://t.co/Xe6lojB7TS ^_^ Also, thanks to the https://t.co/o5OwUWEaBD and @LieberInstitute for their support! Latin American R/BioConductor Developers Workshop 2018 Today I’m excited to invite you to shepherd the Latin American R/BioConductor Developers Workshop 2018! It’ll be held in Cuernavaca, Mexico from July 30th to August 3rd, 2018. You can find the official utterance in the Bioconductor support website. Let me share with you why I’m excited well-nigh this workshop. At BioC2017, Alejandro Reyes and I talked for a while well-nigh the low representation of Latin Americans through out the years that either of us have attended the BioC meetings1. blogdown xerox (template) In a recent blog post I wrote well-nigh having a template for blogdown posts. I wanted to know if it was possible to do this and make my life (and others hopefully) easier for writing new blog posts that are ready to go with the features I commonly re-use. In my case, I like using BiocStyle (Oleś, Morgan, and Huber, 2017) for functions such as CRANpkg(), Biocpkg() and Githubpkg(). I moreover like using knitcitations (Boettiger, 2017) for citing with citep() packages or papers; I use citation() and bib_metadata() to get the necessary information, respectively. blogdown Insert Image addin Have you overly tried inserting an image into a blogdown post? Maybe you have, or maybe you tried and gave up. Lets first review the nonflexible way surpassing getting to the solution I contributed. The nonflexible way The process involves copying the target image to the static directory that corresponds to the blogdown post. Lets say that your post is tabbed 2018-03-07-my-new-post.Rmd and lives at content/post/, so it’s full path is content/post/2018-03-07-my-new-post. R markdown blog template This blog post is mostly for myself but maybe it’s useful to others. It contains my current R markdown blog template. I initially posted this as a question at StackOverflow. Then I read how much a undersong we put in Yihui Xie and decided that my current setup (copy-pasting) works just fine. In any specimen using blogdown with the RStudio IDE is much simpler than what I used to do in the past with jekyll or with plane my prior setup with blogdown. Updating R As you might know by now, the latest R version was recently released (R 3.4.0). That ways that you are highly encouraged to update your R installation. There are several ways to do this some of which are documented in these other blog posts: Tal Galili, 2013, Kris Eberwein, 2015. You would think that it's just a matter of downloading the latest R installer for your OS, installing it, and standing your analysis. How to ask for help for Bioconductor packages tl;dr Please post your question at the Bioconductor support website https://support.bioconductor.org/ and trammels the posting guide http://www.bioconductor.org/help/support/posting-guide/. It's important that you provide reproducible lawmaking and information well-nigh your R session. Recently I have been getting increasingly questions well-nigh several packages I maintain. It's unconfined to see increasingly interest from users, but at the same time most questions lack the information I need to help the users. I have moreover gotten most of the questions via email, which is why I am writing this post. Easily explore a table with shinycsv Have you overly had to explore a table with data? I believe the wordplay is yes for most people that work at a computer or plane just use it for communicating with their friends and family. Tables of data pop up everywhere, for example in personal finance. Websites like Mint.com indulge you to download your transactions in a CSV file tabbed transactions.csv. CSV is one of the many formats for storing tables and most likely when you try to unshut the transactions. Finding possible matriculation schedules Over the weekend my brother wanted to icon out his matriculation schedule for the next semester. He is a veterinary medicine and zootechnology student at UNAM. For this upcoming semester there is a set of classes he has to take and each has 8 or so instructor options. The website where he finds the matriculation times lists well-nigh 8 pre-constructed matriculation schedules. So he normally finds one he likes quite a bit, and then manually starts checking if he can transpiration X instructor for Y for a given class. > © 2011-2018 Leonardo Collado Torres under (CC) BY-NC-SA 4.0. All thoughts and opinions here are my own. · Powered by the Academic theme for Hugo. × Cite Copy Download